Service quotas and endpoints for Amazon Omics - AWS General Reference

Service quotas and endpoints for Amazon Omics

Regions and endpoints for Amazon Omics

Region Name Region Endpoint Protocol
US East (N. Virginia) us-east-1 HTTPS
US West (Oregon) us-west-2 HTTPS
Asia Pacific (Singapore) ap-southeast-1 HTTPS
Europe (Frankfurt) eu-central-1 HTTPS
Europe (Ireland) eu-west-1 HTTPS
Europe (London) eu-west-2 HTTPS

Throttling and quotas for Amazon Omics

Your AWS account has default quotas, formerly referred to as limits, for each AWS service. Unless otherwise noted, each quota is Region-specific. You can request increases for some quotas, and other quotas cannot be increased.

To view the quotas for Omics, open the Service Quotas console. In the navigation pane, choose AWS services and select Omics.

To request a quota increase, see Requesting a Quota Increase in the Service Quotas User Guide. If the quota is not yet available in Service Quotas, use the limit increase form.

Your AWS account has the following quotas related to Omics.

Maximum Resource per account or region Default
Sequence stores 20
Reference stores 1
Read sets per sequence store 1,000,000
References per reference store 50
Concurrent sequence or reference import jobs 5
Concurrent sequence or reference export jobs 5
Read sets per activation job 20
Concurrent activation jobs 25
Read set sources per import job 100
Read sets per export job 100
Number of workflows 100
Number of workflow runs (active or inactive) 200
Number of run groups 10
Active workflow runs 3
Concurrent tasks per run 10
Concurrent active CPUs 512
Workflow run duration (hours) 168
Run storage capacity (GB) 9600
Variant stores 10
Annotation stores 10
Concurrent variant or annotation store import jobs 5
Files per variant store import job 1000
Files per annotation store import job 1
Variant store import job file size (GB) 20
Annotation store import file size (GB) 20
Max part size for a direct upload (MiB) 100
Max parts in file for direct upload 10000

The throttling quotas for Omics are as follows. All are in transactions-per-second(TPS).

API Operation Maximum transactions per second (TPS)
CreateSequenceStore, CreateReferenceStore, DeleteSequenceStore, DeleteReferenceStore 1
GetSequenceStore, ListSequenceStores 5
GetReadSet 10
GetReadSetMetadata, ListReadSets 5
BatchDeleteReadSet 1
StartReadSetImportJob, GetReadSetImportJob, ListReadSetImportJobs 5
StartReadSetExportJob, GetReadSetExportJob, ListReadSetExportJobs 5
GetReferenceStore, ListReferenceStores 5
StartReferencetImportJob, GetReferenceImportJob, ListReferenceImportJobs 5
ListReferences, GetReferenceMetadata 5
DeleteReference 1
StartReadsetActivationJob 1
ListReadsetActivationJobs, GetReadSetActivationJob 5
GetReference 10
TagResource, UntagResource, ListTagsForResource 5
StartRun 0.1
CreateWorkflow 5
CancelRun, DeleteRun, GetRun, GetRunTask, ListRunTasks, ListRuns, StartRun 10
CreateRunGroup, DeleteRunGroup, GetRunGroup, ListRunGroups, UpdateRunGroup 10
DeleteWorkflow, GetWorkflow, ListWorkflows, UpdateWorkflow 10
CreateVariantStore, DeleteVariantStore, GetVariantStore, ListVariantStores, UpdateVariantStore 1
StartVariantImportJob, CancelVariantImportJob, GetVariantImportJob, ListVariantImportJobs 1
CreateAnnotationStore, DeleteAnnotationStore, GetAnnotationStore, ListAnnotationStores, UpdateAnnotationStore 1
StartAnnotationImportJob, ListAnnotationImportJobs, GetAnnotationImportJob, CancelAnnotationImportJob 1
CreateMultipartReadSetUpload, CompleteMultipartReadSetUpload, AbortMultipartReadSetUpload 1
UploadReadSetPart 4
ListMultipartReadSetUploads, ListReadSetUploadParts 5