AWS Tools for Windows PowerShell
Command Reference

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Synopsis

Calls the Amazon Omics StartAnnotationImportJob API operation.

Syntax

Start-OMICSAnnotationImportJob
-DestinationName <String>
-AnnotationField <Hashtable>
-ReadOptions_Comment <String>
-ReadOptions_Encoding <String>
-ReadOptions_Escape <String>
-ReadOptions_EscapeQuote <Boolean>
-ReadOptions_Header <Boolean>
-VcfOptions_IgnoreFilterField <Boolean>
-VcfOptions_IgnoreQualField <Boolean>
-Item <AnnotationImportItemSource[]>
-ReadOptions_LineSep <String>
-ReadOptions_Quote <String>
-ReadOptions_QuoteAll <Boolean>
-RoleArn <String>
-RunLeftNormalization <Boolean>
-ReadOptions_Sep <String>
-VersionName <String>
-Select <String>
-PassThru <SwitchParameter>
-Force <SwitchParameter>
-ClientConfig <AmazonOmicsConfig>

Description

Starts an annotation import job.

Parameters

-AnnotationField <Hashtable>
The annotation schema generated by the parsed annotation data.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesAnnotationFields
-ClientConfig <AmazonOmicsConfig>
Amazon.PowerShell.Cmdlets.OMICS.AmazonOmicsClientCmdlet.ClientConfig
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
-DestinationName <String>
A destination annotation store for the job.
Required?True
Position?1
Accept pipeline input?True (ByValue, ByPropertyName)
-Force <SwitchParameter>
This parameter overrides confirmation prompts to force the cmdlet to continue its operation. This parameter should always be used with caution.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
-Item <AnnotationImportItemSource[]>
Items to import.
Required?True
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesItems
-PassThru <SwitchParameter>
Changes the cmdlet behavior to return the value passed to the DestinationName parameter. The -PassThru parameter is deprecated, use -Select '^DestinationName' instead. This parameter will be removed in a future version.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
-ReadOptions_Comment <String>
The file's comment character.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_Comment
-ReadOptions_Encoding <String>
The file's encoding.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_Encoding
-ReadOptions_Escape <String>
A character for escaping quotes in the file.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_Escape
-ReadOptions_EscapeQuote <Boolean>
Whether quotes need to be escaped in the file.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_EscapeQuotes
-ReadOptions_Header <Boolean>
Whether the file has a header row.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_Header
-ReadOptions_LineSep <String>
A line separator for the file.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_LineSep
-ReadOptions_Quote <String>
The file's quote character.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_Quote
-ReadOptions_QuoteAll <Boolean>
Whether all values need to be quoted, or just those that contain quotes.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_QuoteAll
-ReadOptions_Sep <String>
The file's field separator.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_TsvOptions_ReadOptions_Sep
-RoleArn <String>
A service role for the job.
Required?True
Position?Named
Accept pipeline input?True (ByPropertyName)
-RunLeftNormalization <Boolean>
The job's left normalization setting.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
-Select <String>
Use the -Select parameter to control the cmdlet output. The default value is 'JobId'. Specifying -Select '*' will result in the cmdlet returning the whole service response (Amazon.Omics.Model.StartAnnotationImportJobResponse). Specifying the name of a property of type Amazon.Omics.Model.StartAnnotationImportJobResponse will result in that property being returned. Specifying -Select '^ParameterName' will result in the cmdlet returning the selected cmdlet parameter value.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
-VcfOptions_IgnoreFilterField <Boolean>
The file's ignore filter field setting.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_VcfOptions_IgnoreFilterField
-VcfOptions_IgnoreQualField <Boolean>
The file's ignore qual field setting.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesFormatOptions_VcfOptions_IgnoreQualField
-VersionName <String>
The name of the annotation store version.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)

Common Credential and Region Parameters

-AccessKey <String>
The AWS access key for the user account. This can be a temporary access key if the corresponding session token is supplied to the -SessionToken parameter.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesAK
-Credential <AWSCredentials>
An AWSCredentials object instance containing access and secret key information, and optionally a token for session-based credentials.
Required?False
Position?Named
Accept pipeline input?True (ByValue, ByPropertyName)
-EndpointUrl <String>
The endpoint to make the call against.Note: This parameter is primarily for internal AWS use and is not required/should not be specified for normal usage. The cmdlets normally determine which endpoint to call based on the region specified to the -Region parameter or set as default in the shell (via Set-DefaultAWSRegion). Only specify this parameter if you must direct the call to a specific custom endpoint.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
-NetworkCredential <PSCredential>
Used with SAML-based authentication when ProfileName references a SAML role profile. Contains the network credentials to be supplied during authentication with the configured identity provider's endpoint. This parameter is not required if the user's default network identity can or should be used during authentication.
Required?False
Position?Named
Accept pipeline input?True (ByValue, ByPropertyName)
-ProfileLocation <String>
Used to specify the name and location of the ini-format credential file (shared with the AWS CLI and other AWS SDKs)If this optional parameter is omitted this cmdlet will search the encrypted credential file used by the AWS SDK for .NET and AWS Toolkit for Visual Studio first. If the profile is not found then the cmdlet will search in the ini-format credential file at the default location: (user's home directory)\.aws\credentials.If this parameter is specified then this cmdlet will only search the ini-format credential file at the location given.As the current folder can vary in a shell or during script execution it is advised that you use specify a fully qualified path instead of a relative path.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesAWSProfilesLocation, ProfilesLocation
-ProfileName <String>
The user-defined name of an AWS credentials or SAML-based role profile containing credential information. The profile is expected to be found in the secure credential file shared with the AWS SDK for .NET and AWS Toolkit for Visual Studio. You can also specify the name of a profile stored in the .ini-format credential file used with the AWS CLI and other AWS SDKs.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesStoredCredentials, AWSProfileName
-Region <Object>
The system name of an AWS region or an AWSRegion instance. This governs the endpoint that will be used when calling service operations. Note that the AWS resources referenced in a call are usually region-specific.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesRegionToCall
-SecretKey <String>
The AWS secret key for the user account. This can be a temporary secret key if the corresponding session token is supplied to the -SessionToken parameter.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesSK, SecretAccessKey
-SessionToken <String>
The session token if the access and secret keys are temporary session-based credentials.
Required?False
Position?Named
Accept pipeline input?True (ByPropertyName)
AliasesST

Outputs

System.String or Amazon.Omics.Model.StartAnnotationImportJobResponse
This cmdlet returns a System.String object. The service call response (type Amazon.Omics.Model.StartAnnotationImportJobResponse) can also be referenced from properties attached to the cmdlet entry in the $AWSHistory stack.
AWS Tools for PowerShell User Guide

Supported Version

AWS Tools for PowerShell: 2.x.y.z