Lifecycle Configuration Best Practices
The following are best practices for using lifecycle configurations:
Important
We do not recommend storing sensitive information in your lifecycle configuration script.
-
Lifecycle configurations run as the
root
user. If your script makes any changes within the/home/ec2-user/SageMaker
directory, (for example, installing a package withpip
), use the commandsudo -u ec2-user
to run as theec2-user
user. This is the same user that Amazon SageMaker runs as. -
SageMaker notebook instances use
conda
environments to implement different kernels for Jupyter notebooks. If you want to install packages that are available to one or more notebook kernels, enclose the commands to install the packages withconda
environment commands that activate the conda environment that contains the kernel where you want to install the packages.For example, if you want to install a package only for the
python3
environment, use the following code:#!/bin/bash sudo -u ec2-user -i <<EOF # This will affect only the Jupyter kernel called "conda_python3". source activate python3 # Replace
myPackage
with the name of the package you want to install. pip installmyPackage
# You can also perform "conda install" here as well. source deactivate EOFIf you want to install a package in all conda environments in the notebook instance, use the following code:
#!/bin/bash sudo -u ec2-user -i <<EOF # Note that "base" is special environment name, include it there as well. for env in base /home/ec2-user/anaconda3/envs/*; do source /home/ec2-user/anaconda3/bin/activate $(basename "$env") # Installing packages in the Jupyter system environment can affect stability of your SageMaker # Notebook Instance. You can remove this check if you'd like to install Jupyter extensions, etc. if [ $env = 'JupyterSystemEnv' ]; then continue fi # Replace
myPackage
with the name of the package you want to install. pip install --upgrade --quietmyPackage
# You can also perform "conda install" here as well. source /home/ec2-user/anaconda3/bin/deactivate done EOF -
You must store all conda environments in the default environments folder (/home/user/anaconda3/envs).
Important
When you create or change a script, we recommend that you use a text editor that provides Unix-style line breaks, such as the text editor available in the console when you create a notebook. Copying text from a non-Linux operating system might introduce incompatible line breaks and result in an unexpected error.