AWS Shared Security Responsibility Model
Security and compliance is a shared responsibility between AWS and the customer. The AWS Shared Responsibility Model
With EKS Auto Mode, AWS is responsible for the configuration, patching, and health of the EC2 instances so that customers can focus on the Amazon Virtual Private Cloud (Amazon VPC)
EKS Auto Mode accomplishes this by using EC2 managed instances. Using managed instances, customers can delegate operational control over the instances to the Amazon EKS service. EKS is then responsible for patching the components that are delivered as part of the AMI. This combines with the 21-day maximum node lifetime for Auto Mode, so that nodes are regularly replaced with newer nodes running the most recently released version of the AMI, containing the latest patches.

Figure 1: Shared Responsibility Model with EKS Auto Mode